Publications

Below you will find recent publications by all members of the BioImaging & Optics Platform.

To find all publications, you may head to InfoScience.

A Derived Positional Mapping of Inhibitory Subtypes in the Somatosensory Cortex

D. Keller; J. Meystre; R. V. Veettil; O. Burri; R. Guiet et al. 

Frontiers In Neuroanatomy. 2019-08-06. Vol. 13, p. 78. DOI : 10.3389/fnana.2019.00078.

Vibrio coralliilyticus infection perturbs nutritional exchange and tissue integrity in Pocillopora damicornis

E. Gibbin; A. Vardi; T. Krueger; E. Kramarsky-Winter; O. Shapiro et al. 

Gordon Research Conference on Marine Microbes, Renaissance Tuscany Il Ciocco in Lucca (Barga), Italy., 01/07/2018.

Development of Sample-Adaptable Holders for Lightsheet Microscopy

T. Laroche; O. Burri; L. K. Dubey; A. Seitz 

Frontiers In Neuroanatomy. 2019-03-08. Vol. 13, p. 26. DOI : 10.3389/fnana.2019.00026.

Open Source Tools for Biological Image Analysis

R. Guiet; O. Burri; A. Seitz 

Computer Optimized Microscopy; Humana Press, 2019. p. 460.

An optimized and validated 384-well plate assay to test platelet function in a high-throughput screening format

A. M. Lima; M. E. Bragina; O. Burri; J. B. Chapalay; F. P. Costa-Fraga et al. 

Platelets. 2019-01-01. Vol. 30, num. 5, p. 563-571. DOI : 10.1080/09537104.2018.1514106.

Cellular Uptake and Intracellular Trafficking of Poly(N-(2-Hydroxypropyl) Methacrylamide)

C. Battistella; R. Guiet; O. Burri; A. Seitz; S. Escrig et al. 

Biomacromolecules. 2019. Vol. 20, num. 1, p. 231-242. DOI : 10.1021/acs.biomac.8b01372.

Fluorescent Benzothiazinone Analogues Efficiently and Selectively Label Dpre1 in Mycobacteria and Actinobacteria

R. Sommer; J. Neres; J. Piton; N. Dhar; A. van der Sar et al. 

ACS Chemical Biology. 2018-11-01. Vol. 13, num. 11, p. 3184-3192. DOI : 10.1021/acschembio.8b00790.

Carbon partitioning in the coral-dinoflagellate symbiosis during Pocillopora damicornis-Vibrio coralliilyticus infection

E. Gibbin; A. Gavish; T. Krueger; E. Kramarsky-Winter; O. Shapiro et al. 

Microbial Interactions in Marine Systems., Greifswald, Germany, 20.08.2018.

Podosomes, But not the Maturation status, Determine the Protease-Dependent 3D Migration in human Dendritic cells

C. Cougoule; C. Lastrucci; R. Guiet; R. Mascarau; E. Meunier et al. 

Frontiers In Immunology. 2018-04-30. Vol. 9, p. 846. DOI : 10.3389/fimmu.2018.00846.

TRACMIT: An effective pipeline for tracking and analyzing cells on micropatterns through mitosis

O. Burri; B. Wolf; A. Seitz; P. Gönczy 

Plos One. 2017. Vol. 12, num. 7, p. e0179752. DOI : 10.1371/journal.pone.0179752.

Advances in pancreatic islet monolayer culture on glass surfaces enable super-resolution microscopy and insights into beta cell ciliogenesis and proliferation

E. A. Phelps; C. Cianciaruso; J. Santo-Domingo; M. Pasquier; G. Galliverti et al. 

Scientific Reports. 2017. Vol. 7, p. 45961. DOI : 10.1038/srep45961.

A formin-nucleated actin aster concentrates cell wall hydrolases for cell fusion in fission yeast

O. Dudin; F. O. Bendezu; R. Groux; T. Laroche; A. Seitz et al. 

Journal Of Cell Biology. 2015. Vol. 208, num. 7, p. 897-911. DOI : 10.1083/jcb.201411124.

The Nimrod transmembrane receptor Eater is required for hemocyte attachment to the sessile compartment in Drosophila melanogaster

A. J. Bretscher; V. Honti; O. Binggeli; O. Burri; M. Poidevin et al. 

Biology Open. 2015. Vol. 4, num. 3, p. 355-363. DOI : 10.1242/bio.201410595.

Antibody-Mediated Trapping of Helminth Larvae Requires CD11b and Fc gamma Receptor I

J. E-V. Bieren; B. Volpe; M. Kulagin; D. B. Sutherland; R. Guiet et al. 

Journal Of Immunology. 2015. Vol. 194, num. 3, p. 1154-1163. DOI : 10.4049/jimmunol.1401645.

Correlative multicolor 3D SIM and STORM microscopy

V. Hamel; P. Guichard; M. Fournier; R. Guiet; I. Flückiger et al. 

Biomedical Optics Express. 2014. Vol. 5, num. 10, p. 3326-3336. DOI : 10.1364/BOE.5.003326.

Antibodies Trap Tissue Migrating Helminth Larvae and Prevent Tissue Damage by Driving IL-4Rα-Independent Alternative Differentiation of Macrophages

J. Esser-von Bieren; I. Mosconi; R. Guiet; A. Piersigilli; B. Volpe et al. 

Plos Pathogens. 2013. Vol. 9, num. 11, p. e1003771. DOI : 10.1371/journal.ppat.1003771.

Quantifying the influence of yellow fluorescent protein photoconversion on acceptor photobleaching-based fluorescence resonance energy transfer measurements

A. Seitz; S. Terjung; T. Zimmermann; R. Pepperkok 

Journal of biomedical optics. 2012. Vol. 17, num. 1, p. 011010. DOI : 10.1117/1.JBO.17.1.011010.

Automated analysis of single stem cells in microfluidic traps

S. A. Kobel; O. Burri; A. Griffa; M. Girotra; A. Seitz et al. 

Lab On A Chip. 2012. Vol. 12, p. 2843-2849. DOI : 10.1039/c2lc40317j.

Role of the Glyoxalase System in Astrocyte-Mediated Neuroprotection

M. Belanger; J. Yang; J-M. Petit; T. Laroche; P. J. Magistretti et al. 

Journal Of Neuroscience. 2011. Vol. 31, p. 18338-18352. DOI : 10.1523/JNEUROSCI.1249-11.2011.

The Glyoxalase System In Astrocytes And Neurons

I. Allaman; M. Bélanger; T. Laroche; P. Magistretti 

10th European Meeting on Glial Cells in Health and Disease, Prague, CZECH REPUBLIC, Sep 13-17, 2011.

Photoactivatable and photoconvertible fluorescent probes for protein labeling

D. Maurel; S. Banala; T. Laroche; K. Johnsson 

ACS chemical biology. 2010. Vol. 5, num. 5, p. 507-16. DOI : 10.1021/cb1000229.

Amyloid-beta aggregates cause alterations of astrocytic metabolic phenotype: impact on neuronal viability

I. Allaman; M. Gavillet; M. Bélanger; T. Laroche; D. Viertl et al. 

The Journal of neuroscience : the official journal of the Society for Neuroscience. 2010. Vol. 30, num. 9, p. 3326-3338. DOI : 10.1523/JNEUROSCI.5098-09.2010.

Lte1, Cdc14 and MEN-controlled Cdk inactivation in yeast coordinate rDNA decompaction with late telophase progression

E. Varela; K. Shimada; T. Laroche; D. Leroy; S. M. Gasser 

Embo Journal. 2009. Vol. 28, p. 1562-1575. DOI : 10.1038/emboj.2009.111.

A Stochastic Translation Algorithm: The View Of The Ribosome

O. Burri 

2009.

Micropatterning of Hydrogels by Soft Embossing

S. A. Kobel; M. Limacher; S. Gobaa; T. Laroche; M. P. Lutolf 

Langmuir. 2009. Vol. 25, num. 15, p. 8774-8779. DOI : 10.1021/la9002115.

Theory of molecular excitation and relaxation near a plasmonic device

G. Colas des Francs; C. Girard; T. Laroche; G. Lévêque; O. J. F. Martin et al. 

Journal Of Chemical Physics. 2007. Vol. 127, num. 3, p. -. DOI : 10.1063/1.2748753.

Réception par des psychiatres d’un reportage télévisuel sur la folie

O. Burri; M. Mouthon; B. Fauvet 

2007.

Processive movement of single kinesins on crowded microtubules visualized using quantum dots

A. Seitz; T. Surrey 

The EMBO journal. 2006. Vol. 25, num. 2, p. 267-77. DOI : 10.1038/sj.emboj.7600937.

Chromosome looping in yeast: telomere pairing and coordinated movement reflect anchoring efficiency and territorial organization

K. Bystricky; T. Laroche; G. van Houwe; M. Blaszczyk; S. M. Gasser 

The Journal of cell biology. 2005. Vol. 168, num. 3, p. 375-87. DOI : 10.1083/jcb.200409091.

Circadian gene expression in individual fibroblasts: cell-autonomous and self-sustained oscillators pass time to daughter cells

E. Nagoshi; C. Saini; C. Bauer; T. Laroche; F. Naef et al. 

Cell. 2004. Vol. 119, num. 5, p. 693-705. DOI : 10.1016/j.cell.2004.11.015.

Sir-mediated repression can occur independently of chromosomal and subnuclear contexts

M. R. Gartenberg; F. R. Neumann; T. Laroche; M. Blaszczyk; S. M. Gasser 

Cell. 2004. Vol. 119, num. 7, p. 955-67. DOI : 10.1016/j.cell.2004.11.008.

Single-molecule investigation of the interference between kinesin, tau and MAP2c

A. Seitz; H. Kojima; K. Oiwa; E-M. Mandelkow; Y-H. Song et al. 

The EMBO journal. 2002. Vol. 21, num. 18, p. 4896-4905.

Conference Posters

You can find our conference posters here in PDF format

ELMI 2017

ELMI 2016