Bioimaging and Optics Platform
Cells segmented using STARDIST Deep learning, within QuPath software.
Our goal is to provide instruments and more importantly expertise to solve challenging (biological) questions with modern light-microscopy. Therefore the BIOP seeks to create a link between life sciences and engineering to investigate jointly these fundamental fields.
Expertise
Microscopy
Widefield, Confocal, Spinning Disk, Lightsheet, Superresolution, Lifetime Imaging, Microdissection
Image Processing
Workstations, Deconvolution, Deep Learning, Custom Workflows
Highlights
Whole Slide Registration Workflow Published
Our very own Nicolas has recently published a new article in Frontiers entitled: “An Open-Source Whole Slide Image Registration Workflow at Cellular Precision Using Fiji, QuPath and Elastix”
DEVILS is published in F1000R
Our Software Tool Article “DEVILS: a tool for the visualization of large datasets with a high dynamic range” is available on F1000R
