Spatial Transcriptomics

We offer a 10X Genomics Visium Spatial Transcriptomics service with the Histology Core Facility. This allows for transcriptome-wide mapping of genes expression onto tissue sections, with concomitant H&E or IF staining. Please contact us for more details.

Our new CytAssist instrument now allows us to process FFPE slides for human and mouse tissues with improved sensitivity and robustness. This probes-based workflow also increases sensitivity for human/mouse fresh-frozen tissues. Other advantages include an option for bigger tissues section (11mm x 11mm), the ability to select an area of interest within a larger tissue section, and the ability to process tissues microarrays. 

In case this tool is not suited for your needs, note that a Visium HD upgrade, bringing single-cell resolution, will be released in the coming months, and that the Histology Core Facility offers other Spatial Transcriptomics options.