This material is presented to ensure timely dissemination of scholarly and technical work. Copyright and all rights therein are retained by authors or by other copyright holders. All persons copying this information are expected to adhere to the terms and constraints invoked by each author’s copyright. In most cases, these works may not be reposted without the explicit permission of the copyright holder.


Journal Articles

Weakly supervised joint whole-slide segmentation and classification in prostate cancer

P. Pati; G. Jaume; Z. Ayadi; K. Thandiackal; B. Bozorgtabar et al. 

Medical Image Analysis. 2023-08-24. Vol. 89, p. 102915. DOI : 10.1016/

Feasibility of accelerated T2 mapping for the preoperative assessment of endometrial carcinoma

Z. Zhang; J. Liu; W. Wang; Y. Zhang; F. Qu et al. 

Frontiers In Oncology. 2023-07-26. Vol. 13, p. 1117148. DOI : 10.3389/fonc.2023.1117148.

High field brain proton magnetic resonance spectroscopy and volumetry in children with chronic, compensated liver disease-A pilot study

C. Cudalbu; L. Xin; B. Marechal; S. Lachat; F. Zangas-Gheri et al. 

Analytical Biochemistry. 2023-07-04. Vol. 675, p. 115212. DOI : 10.1016/j.ab.2023.115212.

Markers of limbic system damage following SARS-CoV-2 infection

M. Thomasson; P. Voruz; A. Cionca; I. J. de Alcantara; A. Nuber-Champier et al. 

Brain Communications. 2023-07-01. Vol. 5, num. 4, p. fcad177. DOI : 10.1093/braincomms/fcad177.

Tractography passes the test: Results from the diffusion-simulated connectivity (disco) challenge

G. Girard; J. Rafael-Patinob; R. Truffet; D. B. Aydogan; N. Adluruh et al. 

Neuroimage. 2023-06-28. Vol. 277, p. 120231. DOI : 10.1016/j.neuroimage.2023.120231.

Widespread intra-axonal signal fraction abnormalities in bipolar disorder from multicompartment diffusion MRI: Sensitivity to diagnosis, association with clinical features and pharmacologic treatment

E. J. Canales-Rodriguez; N. Verdolini; S. Alonso-Lana; M. L. Torres; F. Panicalli et al. 

Human Brain Mapping. 2023-06-26. DOI : 10.1002/hbm.26405.

Cortical alterations after very preterm birth and the association with socio-emotional abilities from childhood to early adolescence

V. Siffredi; M. C. Liverani; C. Borradori-Tolsa; R. Hà-Vinh Leuchter; J-P. Thiran et al. 

Cerebral Cortex. 2023-06-09. Vol. 187, p. 1-13. DOI : 10.1093/cercor/bhad187.

Cellular EXchange Imaging (CEXI): Evaluation of a diffusion model including water exchange in cells using numerical phantoms of permeable spheres

R. M. M. Gardier; J. L. Villarreal Haro; E. J. Canales Rodriguez; I. Jelescu; G. Girard et al. 

Magnetic Resonance in Medicine. 2023-06-06.  p. 1-16. DOI : 10.1002/mrm.29720.

‘connEcted caesarean section’: creating a virtual link between MOthers and their infanTs to ImprOve maternal childbirth experieNce – study protocol for a PILOT trial (e-motion-pilot)

F. Corbaz; E. Boussac; K. Lepigeon; D. G. Dias; S. Marcadent et al. 

Bmj Open. 2023-06-01. Vol. 13, num. 6, p. e065830. DOI : 10.1136/bmjopen-2022-065830.

Brain morphometry in older adults with and without dementia using extremely rapid structural scans

M. L. Eliott; L. C. Hanford; A. Hamadeh; T. Hilbert; T. Kober et al. 

Neuroimage. 2023-05-29. Vol. 276, p. 120173. DOI : 10.1016/j.neuroimage.2023.120173.

Accurate Diagnosis of Cortical and Infratentorial Lesions in Multiple Sclerosis Using Accelerated Fluid and White Matter Suppression Imaging

A. Martin; T. Emorine; I. Megdiche; A. Creange; T. Kober et al. 

Investigative Radiology. 2023-05-01. Vol. 58, num. 5, p. 337-345. DOI : 10.1097/RLI.0000000000000939.

Clinical feasibility and validation of the accelerated T2 mapping sequence GRAPPATINI in brain imaging

N. Gruenebach; M. A. A. Mercado; N. F. Grauhan; A. Sanner; A. Kronfeld et al. 

Heliyon. 2023-04-01. Vol. 9, num. 4, p. e15064. DOI : 10.1016/j.heliyon.2023.e15064.

Axial and radial axonal diffusivities and radii from single encoding strongly diffusion-weighted MRI

M. Pizzolato; E. J. Canales-Rodriguez; M. Andersson; T. B. Dyrby 

Medical Image Analysis. 2023-03-01. Vol. 86, p. 102767. DOI : 10.1016/

Telecytologic diagnosis of cervical smears for triage of self-sampled human papillomavirus–positive women in a resource-limited setting: concept development before implementation

P. Vassilakos; H. Clarke; M. Murtas; T. G. Stegmüller; A. Wisniak et al. 

Journal of the American Society of Cytopathology. 2023. Vol. 12, num. 3, p. 170-180. DOI : 10.1016/j.jasc.2023.02.001.

Source-Free Open-Set Domain Adaptation for Histopathological Images via Distilling Self-Supervised Vision Transformer

G. M. G. Vray; D. Tomar; B. Bozorgtabar; J-P. Thiran 

2023.  p. 1-11.

Conference Papers

Adaptive Similarity Bootstrapping for Self-Distillation based Representation Learning

T. Lebailly; T. G. Stegmüller; B. Bozorgtabar; J-P. Thiran; T. Tuytelaars 

2023. International Conference on Computer Vision (ICCV2023), Paris, France, October 2-6, 2023.

CrOC: Cross-View Online Clustering for Dense Visual Representation Learning

T. G. Stegmüller; T. Lebailly; B. Bozorgtabar; T. Tuytelaars; J-P. Thiran 

2023. The IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR2023), Vancouver, Canada, June, 18-22, 2023.

TeSLA: Test-Time Self-Learning With Automatic Adversarial Augmentation

D. Tomar; G. M. G. Vray; B. Bozorgtabar; J-P. Thiran 

2023. IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR), 2023, Vancouver, Canada, June 18-22, 2023.

ScoreNet: Learning Non-Uniform Attention and Augmentation for Transformer-Based Histopathological Image Classification

T. Stegmuller; B. Bozorgtabar; A. Spahr; J-P. Thiran 

2023-01-01. 23rd IEEE/CVF Winter Conference on Applications of Computer Vision (WACV 2023), Waikoloa, HI, Jan 03-07, 2023. p. 6159-6168. DOI : 10.1109/WACV56688.2023.00611.


Proton beam radiation therapy for vestibular schwannomas-tumor control and hearing preservation rates: a systematic review and meta-analysis

A. Santacroce; M-F. Trandafirescu; M. Levivier; D. Peters; C. Fuerweger et al. 

Neurosurgical Review. 2023-07-04. Vol. 46, num. 1, p. 163. DOI : 10.1007/s10143-023-02060-x.

Morphological assessment of cartilage and osteoarthritis in clinical practice and research: Intermediate-weighted fat-suppressed sequences and beyond

P. Omoumi; C. Mourad; J-B. Ledoux; T. Hilbert 

Skeletal Radiology. 2023-05-08. DOI : 10.1007/s00256-023-04343-2.

Synthetic Contrasts in Musculoskeletal MRI A Review

T. Hilbert; P. Omoumi; M. Raudner; T. Kober 

Investigative Radiology. 2023-01-01. Vol. 58, num. 1, p. 111-119. DOI : 10.1097/RLI.0000000000000917.


Self-Supervised Learning for Patient Stratification and Survival Analysis in Computational Pathology: An Application to Colorectal Cancer

C. R. Abbet / J-P. Thiran; I. Zlobec (Dir.)  

Lausanne, EPFL, 2023. 


Journal Articles

Assessment of idiopathic inflammatory myopathy using a deep learning method for muscle T2 mapping segmentation

F. Wang; S. Zhou; B. Hou; F. Santini; L. Yuan et al. 

European Radiology. 2022-11-18. DOI : 10.1007/s00330-022-09254-9.

Cerebral Metabolic Dysfunction at the Acute Phase of Traumatic Brain Injury Correlates with Long-Term Tissue Loss

A. Bernini; S. Magnoni; J-P. Miroz; R. Corredor-Jerez; G. Bertolini et al. 

Journal Of Neurotrauma. 2022-11-04. DOI : 10.1089/neu.2022.0161.

Compressed sensing (CS) MP2RAGE versus standard MPRAGE: A of derived brain volume measurements

P. M. Ferraro; L. Gualco; M. Costagli; S. Schiavi; M. Ponzano et al. 

Physica Medica-European Journal Of Medical Physics. 2022-11-01. Vol. 103, p. 166-174. DOI : 10.1016/j.ejmp.2022.10.023.

Real-time shimming with FID navigators

T. E. Wallace; T. Kober; J. P. Stockmann; J. R. Polimeni; S. K. Warfield et al. 

Magnetic Resonance In Medicine. 2022-09-12. Vol. 88, num. 6, p. 2548-2563. DOI : 10.1002/mrm.29421.

Prospective motion correction in kidney MRI using FID navigators

C. Ariyurek; T. E. Wallace; T. Kober; S. Kurugol; O. Afacan 

Magnetic Resonance In Medicine. 2022-09-05. DOI : 10.1002/mrm.29424.

3-Dimensional Fluid and White Matter Suppression Magnetic Resonance Imaging Sequence Accelerated With Compressed Sensing Improves Multiple Sclerosis Cervical Spinal Cord Lesion Detection Compared With Standard 2-Dimensional Imaging

T. Emorine; I. Megdiche; P. Brugieres; A. Creange; T. Kober et al. 

Investigative Radiology. 2022-09-01. Vol. 57, num. 9, p. 575-584. DOI : 10.1097/RLI.0000000000000874.

Diffusion-relaxation scattered MR signal representation in a multi-parametric sequence

F. Bogusz; T. Pieciak; M. Afzali; M. Pizzolato 

Magnetic Resonance Imaging. 2022-09-01. Vol. 91, p. 52-61. DOI : 10.1016/j.mri.2022.05.007.

A multi-scale probabilistic atlas of the human connectome

Y. Aleman-Gomez; A. Griffa; J-C. Houde; E. Najdenovska; S. Magon et al. 

Scientific Data. 2022-08-23. Vol. 9, num. 1, p. 516. DOI : 10.1038/s41597-022-01624-8.

Variability and reproducibility of multi-echo T2 relaxometry: Insights from multi-site, multi-session and multi-subject MRI acquisitions

E. Fischi Gomez; G. Girard; P. J. Koch; T. Yu; M. Pizzolato et al. 

Frontiers in Radiology. 2022-07-28. DOI : 10.3389/fradi.2022.930666.

Text as signal. A tutorial with case studies focusing on social media (Twitter)

E. Mayor; L. M. Bietti; E. J. Canales-Rodriguez 

Behavior Research Methods. 2022-07-25. DOI : 10.3758/s13428-022-01917-1.

Comparison of T2 Quantification Strategies in the Abdominal-Pelvic Region for Clinical Use

R. Draveny; K. Ambarki; F. Han; T. Hilbert; V. Laurent et al. 

Investigative Radiology. 2022-06-01. Vol. 57, num. 6, p. 412-421. DOI : 10.1097/RLI.0000000000000852.

Through-Plane Super-Resolution With Autoencoders in Diffusion Magnetic Resonance Imaging of the Developing Human Brain

H. Kebiri; E. J. Canales-Rodriguez; H. Lajous; P. de Dumast; G. Girard et al. 

Frontiers In Neurology. 2022-05-02. Vol. 13, p. 827816. DOI : 10.3389/fneur.2022.827816.

T2 mapping for the characterization of prostate lesions

T. Hepp; L. Kalmbach; M. Kolb; P. Martirosian; T. Hilbert et al. 

World Journal Of Urology. 2022-03-31. Vol. 40, p. 1455–1461. DOI : 10.1007/s00345-022-03991-8.

NPTX1-related oculomotor apraxia: an intra-hemispheric disconnection disorder

C. Helmchen; P. J. Koch; G. Girard; N. Bruggemann; B. Machner et al. 

Journal Of Neurology. 2022-03-14. Vol. 269, p. 3931–3936. DOI : 10.1007/s00415-022-11057-3.

Does powder averaging remove dispersion bias in diffusion MRI diameter estimates within real 3D axonal architectures?

M. Andersson; M. Pizzolato; H. M. Kjer; K. F. Skodborg; H. Lundell et al. 

Neuroimage. 2022-03-01. Vol. 248, p. 118718. DOI : 10.1016/j.neuroimage.2021.118718.

Editorial: Computational Neuroimage Analysis Tools for Brain (Diseases) Biomarkers

D. M. Sima; M. Bach Cuadra; T. B. Dyrby; K. Van Leemput 

Frontiers In Neuroscience. 2022-02-18. Vol. 16, p. 841807. DOI : 10.3389/fnins.2022.841807.

Value of T-2 Mapping MRI for Prostate Cancer Detection and Classification

M. Klingebiel; L. Schimmoeller; E. Weiland; T. Franiel; K. Jannusch et al. 

Journal Of Magnetic Resonance Imaging. 2022-01-17. Vol. 56, num. 2, p. 413-422. DOI : 10.1002/jmri.28061.

BMAT: An open-source BIDS managing and analysis tool

C. Vanden Bulcke; M. Wynen; J. Detobel; F. La Rosa; M. Absinta et al. 

Neuroimage-Clinical. 2022-01-01. Vol. 36, p. 103252. DOI : 10.1016/j.nicl.2022.103252.

Microstructure estimation from diffusion-MRI: Compartmentalized models in permeable cellular tissue

R. M. M. Gardier; J. L. Villarreal Haro; E. J. Canales Rodriguez; I. Jelescu; G. Girard et al. 

2022. DOI : 10.48550/arXiv.2209.02293.

Cortical and subcortical changes in resting-state neuronal activity and connectivity in early symptomatic ALS and advanced frontotemporal dementia

R. Govaarts; E. Beeldman; M. Fraschini; A. Griffa; M. M. A. Engels et al. 

Neuroimage-Clinical. 2022-01-01. Vol. 34, p. 102965. DOI : 10.1016/j.nicl.2022.102965.

Simultaneous 3D acquisition of H-1 MRF and Na-23 MRI

Z. Yu; S. Hodono; O. Dergachyova; T. Hilbert; B. Wang et al. 

Magnetic Resonance In Medicine. 2022. Vol. 87, num. 5, p. 2299-2312. DOI : 10.1002/mrm.29135.

Q-Dixon and GRAPPATINI T2 Mapping Parameters: A Whole Spinal Assessment of the Relationship Between Osteoporosis and Intervertebral Disc Degeneration

X. Li; Y. Xie; R. Lu; Y. Zhang; Q. Li et al. 

Journal Of Magnetic Resonance Imaging. 2022. Vol. 55, num. 5, p. 1536-1546. DOI : 10.1002/jmri.27959.

Conference Papers

OptTTA: Learnable Test-Time Augmentation for Source-Free Medical Image Segmentation Under Domain Shift

D. Tomar; G. M. G. Vray; B. Bozorgtabar; J-P. Thiran 

2022. 5th International Conference on Medical Imaging with Deep Learning, Zurich, Switzerland, July 6-8, 2022. p. 1192-1217.

Slice Estimation in Diffusion MRI of Neonatal and Fetal Brains in Image and Spherical Harmonics Domains Using Autoencoders

H. Kebiri; G. Girard; Y. Aleman-Gomez; T. Yu; A. Jakab et al. 

2022-01-01. 13th International Workshop on Computational Diffusion MRI (CDMRI), Singapore, SINGAPORE, Sep 22, 2022. p. 3-13. DOI : 10.1007/978-3-031-21206-2_1.

Natural-Looking Adversarial Examples From Freehand Sketches

H. G. Kim; D. Nanni; S. Suesstrunk 

2022-01-01. 47th IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), Singapore, SINGAPORE, May 22-27, 2022. p. 3723-3727. DOI : 10.1109/ICASSP43922.2022.9747480.


Smartphone-Based Visual Inspection with Acetic Acid: An Innovative Tool to Improve Cervical Cancer Screening in Low-Resource Setting

J. Sami; S. L. Makajio; E. Jeannot; B. Kenfack; R. Vinals et al. 

Healthcare. 2022-02-01. Vol. 10, num. 2, p. 391. DOI : 10.3390/healthcare10020391.

The functional characterization of callosal connections

G. M. Innocenti; K. Schmidt; C. Milleret; M. Fabri; M. G. Knyazeva et al. 

Progress In Neurobiology. 2022-01-01. Vol. 208, p. 102186. DOI : 10.1016/j.pneurobio.2021.102186.

What we learn about bipolar disorder from large-scale neuroimaging: Findings and future directions from theENIGMABipolar Disorder Working Group

C. R. K. Ching; D. P. Hibar; T. P. Gurholt; A. Nunes; S. I. Thomopoulos et al. 

Human Brain Mapping. 2022. Vol. 43, num. 1, p. 56-82. DOI : 10.1002/hbm.25098.


Combining Model Driven and Data Driven Approaches for Inverse Problems in Parameter Estimation and Image Reconstruction: From Modelling to Validation

T. Yu / J-P. Thiran; M. Bach Cuadra (Dir.)  

Lausanne, EPFL, 2022. 

Deep learning-based analysis of multiple sclerosis lesions with high and ultra-high field MRI

F. La Rosa / J-P. Thiran; M. Bach Cuadra (Dir.)  

Lausanne, EPFL, 2022. 

Graph Representation Learning in Computational Pathology

G. Jaume / J-P. Thiran; M. Gabrani (Dir.)  

Lausanne, EPFL, 2022. 


Towards a high-density packing white matter substrate generator for Monte-Carlo simulations

J. L. Villarreal Haro; R. M. M. Gardier; E. J. Canales Rodriguez; G. Girard; J-P. Thiran et al. 

2022 Joint Annual Meeting ISMRM-ESMRMB & ISMRT 31st Annual Meeting, London, England, UK, May, 07-12, 2022.

Estimation of numerical substrate properties with compartmentalized models from Monte-Carlo simulated DW-MRI signals

R. M. M. Gardier; J. L. Villarreal Haro; E. J. Canales Rodriguez; G. Girard; J. R. Patino Lopez et al. 

Joint Annual Meeting ISMRM-ESMRMB & ISMRT 31st Annual Meeting, London, England, UK, 07-12 May 2022.


Journal Articles

Data-driven myelin water imaging based on T-1 and T-2 relaxometry

G. F. Piredda; T. Hilbert; V. Ravano; E. J. Canales-Rodriguez; M. Pizzolato et al. 

Nmr In Biomedicine. 2021-12-22.  p. e4668. DOI : 10.1002/nbm.4668.

Revisiting the T-2 spectrum imaging inverse problem: Bayesian regularized non-negative least squares

E. J. Canales-Rodriguez; M. Pizzolato; T. Yu; G. F. Piredda; T. Hilbert et al. 

Neuroimage. 2021-12-01. Vol. 244, p. 118582. DOI : 10.1016/j.neuroimage.2021.118582.

Synthetic T-2-weighted images of the lumbar spine derived from an accelerated T-2 mapping sequence: Comparison to conventional T(2)w turbo spin echo

M. Raudner; D. F. Toth; M. M. Schreiner; T. Hilbert; T. Kober et al. 

Magnetic Resonance Imaging. 2021-12-01. Vol. 84, p. 92-100. DOI : 10.1016/j.mri.2021.09.011.

Additive and interaction effects of working memory and motor sequence training on brain functional connectivity

P. Zuber; L. Gaetano; A. Griffa; M. Huerbin; L. Pedulla et al. 

Scientific Reports. 2021-11-29. Vol. 11, num. 1, p. 23089. DOI : 10.1038/s41598-021-02492-9.

Magnetoencephalography Brain Signatures Relate to Cognition and Cognitive Reserve in the Oldest-Old: The EMIF-AD 90+Study

A. Griffa; N. Legdeur; M. Badissi; M. P. van den Heuvel; C. J. Stam et al. 

Frontiers In Aging Neuroscience. 2021-11-25. Vol. 13, p. 746373. DOI : 10.3389/fnagi.2021.746373.

Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?

K. G. Schilling; F. Rheault; L. Petit; C. B. Hansen; V. Nath et al. 

Neuroimage. 2021-11-01. Vol. 243, p. 118502. DOI : 10.1016/j.neuroimage.2021.118502.

C-reactive protein and white matter microstructural changes in COVID-19 patients with encephalopathy

A. Rhally; A. Griffa; S. Kremer; M. Uginet; G. Breville et al. 

Journal Of Neural Transmission. 2021-10-28. Vol. 128, num. 12, p. 1899-1906. DOI : 10.1007/s00702-021-02429-6.

The diffusion-simulated connectivity (DiSCo) dataset

J. Rafael-Patino; G. Girard; R. Truffet; M. Pizzolato; E. Caruyer et al. 

Data In Brief. 2021-10-01. Vol. 38, p. 107429. DOI : 10.1016/j.dib.2021.107429.

Gamma Knife radiosurgery as salvage therapy for gangliogliomas after initial microsurgical resection

C. Tuleasca; I. Peciu-Florianu; V. Enora; N. Reyns 

Journal Of Clinical Neuroscience. 2021-10-01. Vol. 92, p. 98-102. DOI : 10.1016/j.jocn.2021.07.059.

Validating atlas-based lesion disconnectomics in multiple sclerosis: A retrospective multi-centric study

V. Ravano; M. Andelova; M. J. Fartaria; M. F. -W. Mahdi; B. M. Maréchal Mortamet et al. 

NeuroImage: Clinical. 2021-09-02. Vol. 32, p. 102817. DOI : 10.1016/j.nicl.2021.102817.

Ultrahigh field in vivo characterization of microstructural abnormalities in the orbitofrontal cortex and amygdala in autism

E. Fischi-Gomez; G. Bonnier; N. Ward; C. Granziera; N. Hadjikhani 

European Journal Of Neuroscience. 2021-08-19. Vol. 54, num. 6, p. 6229-6236. DOI : 10.1111/ejn.15420.

Surgical management of anterior clinoidal meningiomas: consensus statement on behalf of the EANS skull base section

D. Starnoni; C. Tuleasca; L. Giammattei; G. Cossu; M. Bruneau et al. 

Acta Neurochirurgica. 2021-08-16. Vol. 163, p. 3387–3400. DOI : 10.1007/s00701-021-04964-3.

Clinical correlates of white matter lesions in Parkinson’s disease using automated multi-modal segmentation measures

E. Fang; M. J. Fartaria; C. N. Ann; B. Marechal; T. Kober et al. 

Journal Of The Neurological Sciences. 2021-08-15. Vol. 427, p. 117518. DOI : 10.1016/j.jns.2021.117518.

Chronic White Matter Inflammation and Serum Neurofilament Levels in Multiple Sclerosis

P. Maggi; J. Kuhle; S. Schadelin; F. van der Meer; M. Weigel et al. 

Neurology. 2021-08-10. Vol. 97, num. 6, p. E543-E553. DOI : 10.1212/WNL.0000000000012326.

Fetal Brain Biometric Measurements on 3D Super-Resolution Reconstructed T2-Weighted MRI: An Intra- and Inter-observer Agreement Study

M. Khawam; P. de Dumast; P. Deman; H. Kebiri; T. Yu et al. 

Frontiers In Pediatrics. 2021-08-10. Vol. 9, p. 639746. DOI : 10.3389/fped.2021.639746.

Measuring compartmental T-2-orientational dependence in human brain white matter using a tiltable RF coil and diffusion-T-2 correlation MRI

C. M. W. Tax; E. Kleban; M. Chamberland; M. Barakovic; U. Rudrapatna et al. 

Neuroimage. 2021-08-01. Vol. 236, p. 117967. DOI : 10.1016/j.neuroimage.2021.117967.

The Complex Hodological Architecture of the Macaque Dorsal Intraparietal Areas as Emerging from Neural Tracers and DW-MRI Tractography

R. Caminiti; G. Girard; A. Battaglia-Mayer; E. Borra; A. Schito et al. 

Eneuro. 2021-07-01. Vol. 8, num. 4, p. 0102-21.2021. DOI : 10.1523/ENEURO.0102-21.2021.

Bundle-Specific Axon Diameter Index as a New Contrast to Differentiate White Matter Tracts

M. Barakovic; G. Girard; S. Schiavi; D. Romascano; M. Descoteaux et al. 

Frontiers in Neuroscience. 2021-06-15. Vol. 15. DOI : 10.3389/fnins.2021.646034.

Age- and gender-related differences in brain tissue microstructure revealed by multi-component T2 relaxometry

E. J. Canales Rodriguez; S. Alonso-Lana; N. Verdolini; S. Sarró; I. Feria et al. 

Neurobiology of Aging. 2021-06-10. Vol. 106, p. 68-79. DOI : 10.1016/j.neurobiolaging.2021.06.002.

Myelin and axon pathology in multiple sclerosis assessed by myelin water and multi-shell diffusion imaging

R. Rahmanzadeh; P-J. Lu; M. Barakovic; M. Weigel; P. Maggi et al. 

Brain. 2021-06-01. Vol. 144, p. 1684-1696. DOI : 10.1093/brain/awab088.

Disconnectomics of the Rich Club Impacts Motor Recovery After Stroke

P. Egger; G. G. Evangelista; P. J. Koch; C-H. Park; L. Levin-Gleba et al. 

Stroke. 2021-06-01. Vol. 52, num. 6, p. 2115-2124. DOI : 10.1161/STROKEAHA.120.031541.

Improving diagnosis accuracy of brain volume abnormalities during childhood with an automated MP2RAGE-based MRI brain segmentation

M. Serru; B. Marechal; T. Kober; L. Ribier; C. S. Taveau et al. 

Journal Of Neuroradiology. 2021-06-01. Vol. 48, num. 4, p. 259-265. DOI : 10.1016/j.neurad.2019.06.005.

Biologically effective dose and the treatment of AVMs Response

C. Tuleasca; M. Vermandel; N. Reyns 

Journal Of Neurosurgery. 2021-06-01. Vol. 134, num. 6, p. 2008-2009. DOI : 10.3171/2020.9.JNS203545.

Biologically effective dose and prediction of obliteration of unruptured arteriovenous malformations treated by upfront Gamma Knife radiosurgery: a series of 149 consecutive cases

C. Tuleasca; I. Peciu-Florianu; H-A. Leroy; M. Vermandel; M. Faouzi et al. 

Journal Of Neurosurgery. 2021-06-01. Vol. 134, num. 6, p. 1901-1911. DOI : 10.3171/2020.4.JNS201250.

Quantitative comparison of subcortical and ventricular volumetry derived from MPRAGE and MP2RAGE images using different brain morphometry software

J. Alonso; D. Pareto; M. Alberich; T. Kober; B. Marechal et al. 

Magnetic Resonance Materials In Physics Biology And Medicine. 2021-05-29. Vol. 24, p. 903–914. DOI : 10.1007/s10334-021-00933-0.

Differentiation between benign and malignant vertebral compression fractures using qualitative and quantitative analysis of a single fast spin echo T2-weighted Dixon sequence

S. Bacher; S. D. Hajdu; Y. Maeder; V. Dunet; T. Hilbert et al. 

European Radiology. 2021-05-26. Vol. 31, p. 9418–9427. DOI : 10.1007/s00330-021-07947-1.

DDR1 methylation is associated with bipolar disorder and the isoform expression and methylation of myelin genes

B. Garcia-Ruiz; M. C. de Moura; G. Muntane; L. Martorell; E. Bosch et al. 

Epigenomics. 2021-05-04. Vol. 13, num. 11, p. 845-858. DOI : 10.2217/epi-2021-0006.

Beekeeping – artificial neural networks to fight varroa

A. Bugnon; R. Vinals; C. Abbet; G. Chevassus; M. Bohnenblust et al. 

Agrarforschung Schweiz. 2021-05-01. Vol. 12, num. 5, p. 102-108. DOI : 10.34776/afs12-102.

Fluid and White Matter Suppression Imaging and Voxel-Based Morphometric Analysis in Conventional Magnetic Resonance Imaging-Negative Epilepsy

K. Sun; T. Yu; D. Yang; Z. Ren; L. Qiao et al. 

Frontiers In Neurology. 2021-04-29. Vol. 12, p. 651592. DOI : 10.3389/fneur.2021.651592.

Using Dynamic Features for Automatic Cervical Precancer Detection

R. Vinals Terres; P. Vassilakos; M. S. Rad; M. Undurraga; P. Petignat et al. 

Diagnostics. 2021-04-17. Vol. 11, num. 4, p. 716. DOI : 10.3390/diagnostics11040716.

Biologically effective dose correlates with linear tumor volume changes after upfront single-fraction stereotactic radiosurgery for vestibular schwannomas

C. Tuleasca; M. Faouzi; P. Maeder; R. Maire; J. Knisely et al. 

Neurosurgical Review. 2021-04-10. Vol. 44, p. 3527–3537. DOI : 10.1007/s10143-021-01538-w.

GAMER-MRI in Multiple Sclerosis Identifies the Diffusion-Based Microstructural Measures That Are Most Sensitive to Focal Damage: A Deep-Learning-Based Analysis and Clinico-Biological Validation

P-J. Lu; M. Barakovic; M. Weigel; R. Rahmanzadeh; R. Galbusera et al. 

Frontiers In Neuroscience. 2021-04-06. Vol. 15, p. 647535. DOI : 10.3389/fnins.2021.647535.

Conference Papers

Leman-PV as a clinical decision-support tool to assess MS activity: a multicentric longitudinal study at 1.5T and 3T MRI

R. -A. Todea; L. Melie-Garcia; M. Barakovic; N. Siebenborn; R. Rahmanzadeh et al. 

2021-10-01.  p. 456-457.

Automated detection of cortical lesions with single and multi-contrast 7T MRI

F. La Rosa; E. S. Beck; J. Maranzano; J. -P. Thiran; C. Granziera et al. 

2021-10-01.  p. 458-459.

Cortical lesion detection using FLAWS in multiple sclerosis

J. Muller; R. Rahmanzadeh; C. Tsagkas; M. Barakovic; P. -J. Lu et al. 

2021-10-01.  p. 433-434.

An assessment of intra-scanner reproducibility of myelin-sensitive MRI measures

R. Rahmanzadeh; M. Weigel; P. -J. Lu; L. Melie-Garcia; T. D. Nguyen et al. 

2021-10-01.  p. 430-431.

Toward fully automated assessment of the central vein sign using deep learning

T. Huelnhagen; O. Al Louzi; M. J. Fartaria; L. Daboul; D. S. Reich et al. 

2021-10-01.  p. 461-462.

T-1 relaxometry abnormalities in white matter tracts predict functional systems scores in MS

V. Ravano; G. F. Piredda; M. Vaneckova; J. Krasensky; M. Andelova et al. 

2021-10-01.  p. 392-392.

Periventricular gradients of T-1 z-scores correlate with disability in early multiple sclerosis

M. Vaneckova; G. F. Piredda; M. Andelova; J. Krasensky; T. Uher et al. 

2021-10-01.  p. 466-467.

CLaiMS-Net: cortical lesions assessment in multiple sclerosis patients via a convolutional neural network and a single 3T MRI acquisition

F. La Rosa; P. -J. Lu; R. Rahmanzadeh; A. Cagol; M. Barakovic et al. 

2021-10-01.  p. 457-458.

Automated assessment of paramagnetic rim lesions in multiple sclerosis patients with 3T and 7T MP2RAGE

F. La Rosa; G. Barquero; O. Al-Louzi; B. M. Maréchal Mortamet; T. Kober et al. 

2021-05-15. The 2021 ISMRM & SMRT Annual Meeting & Eshibition, [Online], 15-20 may, 2021.

Redox Dysregulation, Myelination Deficit and Dysconnectivity in Schizophrenia: A Translational Study in First Episode Patients and Experimental Models

K. Q. Do; J-H. Cabungcal; M. Cleusix; D. Dwir; M. Fournier et al. 

2021-05-01.  p. S56-S56. DOI : 10.1016/j.biopsych.2021.02.156.


Structural brain correlates in major depression, anxiety disorders and post-traumatic stress disorder: A voxel-based morphometry meta-analysis

M. Serra-Blasco; J. Radua; C. Soriano-Mas; A. G. Benlloch; D. Porta-Caster et al. 

Neuroscience And Biobehavioral Reviews. 2021-10-01. Vol. 129, p. 269-281. DOI : 10.1016/j.neubiorev.2021.07.002.

Cortical Surfaces Integration with Tractography for Structural Connectivity Analysis

E. St-Onge; N. Al-Sharif; G. Girard; G. Theaud; M. Descoteaux 

Brain Connectivity. 2021-09-01. Vol. 11, num. 7, p. 505-517. DOI : 10.1089/brain.2020.0930.

See all LTS5 Publications