EDCB Published theses

It is our pleasure to present the theses undertaken in the frame of the EPFL PhD Program in Computational and Quantitative Biology.


Host-Pathogen Interactions Through the Genomic Lens

Z. M. Xu / J. Fellay (Dir.)  

Lausanne, EPFL, 2023. 

A single-cell-based characterization of mammalian adipose stem and progenitor cell heterogeneity and function

P. Y. Rainer / B. Deplancke (Dir.)  

Lausanne, EPFL, 2023. 


The interplay between human genetic variation, chronic inflammation and persistent infection: relevance for cardiovascular morbidity

F. A. S. Hodel / J. Fellay (Dir.)  

Lausanne, EPFL, 2022. 

Integrative transcriptome analyses of Transposable Elements (TEs) and genes contribute to a better understanding of colorectal cancer

E. Shin / D. Trono; G. Ciriello (Dir.)  

Lausanne, EPFL, 2022. 


New Methods for the Integrative Dynamic Modeling of Biomolecular Structures

S. Träger / M. Dal Peraro (Dir.)  

Lausanne, EPFL, 2021. 

On the use of applied machine learning and digital infrastructure to leverage social media data in health and epidemiology

M. M. Müller / M. Salathé (Dir.)  

Lausanne, EPFL, 2021. 


Inference methods for the study of interacting biological oscillators in single-cells

C. N. Droin / F. Naef (Dir.)  

Lausanne, EPFL, 2020. 

Computational study of transcription factor binding sites

R. F. P. Groux / B. Deplancke; P. Bucher (Dir.)  

Lausanne, EPFL, 2020. 

Contact networks across ages: computational analysis of epidemiological dynamics

G. Lazzari / M. Salathé (Dir.)  

Lausanne, EPFL, 2020. 

Multi-omics reveals abundant mitochondrial genomic and circadian expression variation in the Drosophila Genetic Reference Panel

M. Litovchenko / B. Deplancke (Dir.)  

Lausanne, EPFL, 2020. 


Systems genetics approaches to probe gene function

H. Li / J. Auwerx (Dir.)  

Lausanne, EPFL, 2019. 

Exploring on Protein-DNA interactions

A. S. Kalantzi / M. Dal Peraro (Dir.)  

Lausanne, EPFL, 2019. 

High-Temperature Water Effects on the Fracture Behaviour of Low-Alloy Reactor Pressure Vessel Steels

Z. Que / P. Spätig (Dir.)  

Lausanne, EPFL, 2019. 


publication thumbnail

An “ideal lignin” facilitates full biomass utilization

Y. Li; L. Shuai; H. Kim; A. H. Motagamwala; J. K. Mobley et al. 

Science Advances. 2018. Vol. 4, num. 9, p. eaau2968. DOI : 10.1126/sciadv.aau2968.


Localizing Polygonal Objects in Man-Made Environments

X. Sun / P. Fua (Dir.)  

Lausanne, EPFL, 2015. 


Identity-Preserving Multiple People Tracking

H. B. Ben Shitrit / P. Fua; F. Fleuret (Dir.)  

Lausanne, EPFL, 2014. 


Measuring In Vivo Protein Half-Life

K. Bojkowska; F. Santoni De Sio; I. Barde; S. Offner; S. Verp et al. 

Chemistry & Biology. 2011. Vol. 18, num. 6, p. 805-815. DOI : 10.1016/j.chembiol.2011.03.014.


Etude de la fragilité (KIC) et du comportement sous sollicitation de fatigue de l’acier maraging en fonction de son état structural et des propriétés mécaniques correspondantes

L. Haenny / J. Paschoud (Dir.)  

Lausanne, EPFL, 1973.