iGEM – International Genetically Engineered Machine
COLLABORATE · DESIGN · BUILD · COMPETE
iGEM is an international synthetic biology competition in which teams design and implement engineered biological-based systems to address basic or applied problems. These creative solutions are then evaluated during an international competition with teams from universities from all over the world. The EPFL iGEM team consists of an interdisciplinary group of at most 12 students (both undergraduate and masters) from different schools which collaborate to bring biological, silicon and material components together to solve problems in select areas such as diagnostics, energy, environment, food & nutrition and therapeutics.
iGEM is part of the MAKE interdisciplinary projects supported by EPFL.
What is iGEM?
The iGEM Foundation is an independent, non-profit organization dedicated to the advancement of synthetic biology, education and development through open community collaboration. An important component of this is an annual friendly competition to spur creativity and encourage advances in technologies that employ synthetic biology. Teams submit their designs to be judged and present their solutions in person at an annual jamboree in Paris (virtual in 2021).
How does EPFL participate in iGEM?
EPFL teams have competed in the iGEM competition since 2008. Past EPFL team achievements include Grand prize winner, Awards for Best Education and Public Engagement Project, Best Environment Project, Best Integrated Human Practices, Best Wiki/Website, 11 gold medals, 2 Silver medals and 1 bronze medal. You can view project websites from past EPFL teams here for 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021.
EPFL 2021 iGEM project
CuRe: COPPER BIOREMEDIATION TO REVITALIZE VINEYARDS
Mildew is a destructive fungal disease of plants including wine-producing grapevines. For more than a century, mildew has been treated with ‘bio’ farming compatible copper-based fungicides which adhere to plant leaves. However, though only trace amounts of copper is present in wine made from treated plants, when rain washes the fungicide away, toxic levels of copper contaminate the surrounding soil, inhibiting new cultivation and biodiversity. Our goal is to remove copper from grapevine rainwater runoff to prevent this pollution. We generated yeast strains which express the normally intracellular copper-binding protein CUP1 in multiple copies and configurations on their surface to enable bioadsorption of environmental copper. As a proof-of-concept for a real-world implementation of our decontamination strategy, we have designed and built a prototype bioreactor to enable the removal of copper from rainwater by our modified yeast. We envision our solution could help protect wine growing regions from copper soil pollution.
Congratulations to the 2021 EPFL team!
This years team won a gold medal, the best wiki/website prize and placed in the top 5 of all environment projects. See the results here.
HOW TO ENLIST IN EPFL iGEM
I want to join the next EPFL iGEM team. What should I expect?
First, you will learn about synthetic biology through lectures, lab work, and by participating in the iGEM Jamboree. This will include conceptualizing and designing with the team an innovative solution to an iGEM relevant problem grounded in synthetic biology (wetware) which may also include hardware and software components. EPFL iGEM projects commonly utilize computation and simulation combined with engineering approaches to design, test and build optimal solutions.
Second, you will receive intensive practical training in cutting-edge molecular biology technology. You will assemble molecular components and learn by making. In addition to molecular biology, you will also learn about the other technologies that may contribute to the teams solution. This research will be outside of a course laboratory setting – i.e. you will be performing independent, goal-oriented research.
Third, you and your team members will represent EPFL at the international iGEM competition. Your iGEM project will be judged as a team and your ability to collaborate with and support your team members to achieve the project goals will be key to success at the international level. The course is weighed for 12 ECTS credits for both Bachelors and Masters students in Life Sciences Engineering (BIO-510 coursebook, students from other programs should confirm with their school).
What will be expected of me as part of the iGEM team?
iGEM project participants are expected to attend all introductory lectures during the Spring term. A schedule will be provided to selected team members.
iGEM team members must be present at EPFL for a majority of the time from February to September, in particular during the summer. This requirement is obligatory as the iGEM laboratory component will take place during the summer break. Do not apply if you cannot fulfill this requirement.
During the summer break, iGEM team members will prepare, build and assemble the project for submission to the iGEM competition. This is commonly an intense period with team members working to solve problems and achieve the project goals. Consistent presence in the lab is of utmost importance during this time, equivalent to a full-time job (40+ hours a week). Do not apply if you cannot fulfill this requirement.
What experience do I need to apply?
You DO NOT need prior synthetic biology or any indeed any biology experience to apply. EPFL undergraduate and masters students from any school or discipline may apply to be part of the iGEM team. EPFL iGEM teams are interdisciplinary with each team member contributing to the success of the project. The primary criterion for participation is a strong motivation to learn and deploy synthetic biology based technologies to solve problems in fields such as diagnostics, energy, the environment, nutrition or therapeutics.
How do I apply?
Positions on the iGEM team are limited to a maximum of 12 students. To apply complete the following steps.
In a single pdf document write at the top
1. Your name
2. Your field of study (your major)
3. Your year of study (e.g. 2nd year Bachelor, 1st year Masters, ….)
4. Your GPA (grade point average)
Below this write a 500 word review of any 2021 iGEM project except the EPFL project. The review should A. briefly summarize the project, B. explain the rationale behind the project such as what the team aimed to accomplish, C. criticize the project on factors such as design or failure to accomplish their goals and D. suggest improvements or next steps to build upon the project.
It is understood and encouraged that applicants will be from a wide variety of backgrounds with little or no knowledge of synthetic or other biology. A detailed technical appraisal is not sought, rather the goal is an evaluation of the applicants creative and critical abilities.
The single pdf document should be emailed as an attachment with the title ‘2022 iGEM application – Your name’ to here.
The 2022 iGEM EPFL team application deadline is 12pm CET on the 17th of December 2021.
External Links for more information
iGEM twitter feed
2021 iGEM projects
Article: iGEM comes of age: trends in its research output. (2021) A.K. Jainarayanan et al. Article which highlights the many contributions of iGEM projects to published research and innovation. Read in Nature Biotechnology or on BioRxiv.