Publications

Vous trouverez ci-dessous la liste de toutes les publications liées à l’Institut d’Infectiologie de la Faculté des sciences de la vie.

Si vous souhaitez sélectionner des publications spécifiques par thèmes ou par auteurs, veuillez utiliser le moteur de recherche des publications scientifiques de l’EPFL.

2020

Interbacterial competition and anti‐predatory behavior of environmental Vibrio cholerae strains

N. C. Drebes Dörr; M. Blokesch 

Environmental Microbiology. 2020-09-03. Vol. 22, num. 10, p. 4485-4504. DOI : 10.1111/1462-2920.15224.

Comparison of chitin‐induced natural transformation in pandemic Vibrio cholerae O1 El Tor strains

S. Stutzmann; M. Blokesch 

Environmental Microbiology. 2020-08-29. Vol. 22, num. 10, p. 4149-4166. DOI : 10.1111/1462-2920.15214.

Primate-restricted KRAB zinc finger proteins and target retrotransposons control gene expression in human neurons

P. Turelli; C. Playfoot; D. Grun; C. Raclot; J. Pontis et al. 

Science Advances. 2020-08-28. Vol. 6, num. 35, p. eaba3200. DOI : 10.1126/sciadv.aba3200.

BAF restricts cGAS on nuclear DNA to prevent innate immune activation

B. Guey; M. Wischnewski; A. Decout; K. Makasheva; M. Kaynak et al. 

Science. 2020-08-14. Vol. 369, num. 6505, p. 823-828. DOI : 10.1126/science.aaw6421.

Polygenic modelling of treatment effect heterogeneity

Z. M. Xu; S. Burgess 

Genetic Epidemiology. 2020-08-10. DOI : 10.1002/gepi.22347.

Wnt-controlled sphingolipids modulate Anthrax Toxin Receptor palmitoylation to regulate oriented mitosis in zebrafish

I. Castanon; J. T. Hannich; L. Abrami; F. Huber; M. Dubois et al. 

Nature Communications. 2020-07-03. Vol. 11, num. 1, p. 3317. DOI : 10.1038/s41467-020-17196-3.

High resolution CryoEM structure of the ring-shaped virulence factor EspB from Mycobacterium tuberculosis

J. Piton; F. Pojer; S. Wakatsuki; C. Gati; S. Cole 

Journal of Structural Biology: X. 2020-07-02. Vol. X4, p. 100029. DOI : 10.1016/j.yjsbx.2020.100029.

Designing a Tanzanian Specific SNP Array Add-On to Capture Population-Specific Genetic Variations and to Improve Genotype Imputation

Z. Xu; S. Rueeger; U. Portevin; S. Gagneux; J. Fellay 

2020-07-01. 48th European Mathematical Genetics Meeting (EMGM), Lausanne, SWITZERLAND, Apr 16-17, 2020. p. 227-227. DOI : 10.1159/000507248.

Advanced Quantification Methods To Improve the 18b Dormancy Model for Assessing the Activity of Tuberculosis Drugs In Vitro

E. D. Pieterman; M. J. Sarink; C. Sala; S. T. Cole; J. E. M. de Steenwinkel et al. 

Antimicrobial Agents And Chemotherapy. 2020-07-01. Vol. 64, num. 7, p. e00280-20. DOI : 10.1128/AAC.00280-20.

Emergence of Mycobacterium leprae Rifampin Resistance Evaluated by Whole-Genome Sequencing after 48 Years of Irregular Treatment

C. Avanzi; R. C. Maia; A. Benjak; J. A. Nery; A. M. Sales et al. 

Antimicrobial Agents And Chemotherapy. 2020-07-01. Vol. 64, num. 7, p. e00330. DOI : 10.1128/AAC.00330-20.

Comparative RNA-Seq analyses ofDrosophilaplasmatocytes reveal gene specific signatures in response to clean injury and septic injury

E. Ramond; J. P. Dudzic; B. Lemaitre 

Plos One. 2020-06-29. Vol. 15, num. 6, p. e0235294. DOI : 10.1371/journal.pone.0235294.

Genomic Characterization ofMycobacterium lepraeto Explore Transmission Patterns Identifies New Subtype in Bangladesh

M. Tio-Coma; C. Avanzi; E. M. Verhard; L. Pierneef; A. van Hooij et al. 

Frontiers In Microbiology. 2020-06-16. Vol. 11, p. 1220. DOI : 10.3389/fmicb.2020.01220.

Personalized treatment of immune-related adverse events – balance is required

F. Martins; M. Obeid 

Nature Reviews Clinical Oncology. 2020-06-16. DOI : 10.1038/s41571-020-0400-4.

Seroprevalence of anti-SARS-CoV-2 IgG antibodies in Geneva, Switzerland (SEROCoV-POP): a population-based study

S. Stringhini; A. Wisniak; G. Piumatti; A. S. Azman; S. A. Lauer et al. 

The Lancet. 2020-06-11. DOI : 10.1016/S0140-6736(20)31304-0.

Susceptibility to infection in early life: a growing role for human genetics

A. Borghesi; A. Marzollo; A. Michev; J. Fellay 

Human Genetics. 2020-06-01. Vol. 139, num. 6-7, p. 733-743. DOI : 10.1007/s00439-019-02109-2.

Exploring the interactions between the human and viral genomes

J. Fellay; V. Pedergnana 

Human Genetics. 2020-06-01. Vol. 139, num. 6-7, p. 777-781. DOI : 10.1007/s00439-019-02089-3.

KRAB-zinc finger protein gene expansion in response to active retrotransposons in the murine lineage

G. Wolf; A. de Iaco; M-A. Sun; M. Bruno; M. Tinkham et al. 

eLife. 2020-06-01. Vol. 9, num. e56337. DOI : 10.7554/eLife.56337.

Assessing the impact of non-pharmaceutical interventions on SARS-CoV-2 transmission in Switzerland

L. C. Joseph; P-S. Javier; A. S. Andrew; R. Andrea; F. Jacques 

Swiss Medical Weekly. 2020-05-30. Vol. 150, p. w20295. DOI : 10.4414/smw.20295.

Population Genomics of Mycobacterium leprae Reveals a New Genotype in Madagascar and the Comoros

C. Avanzi; E. Lecorche; F. A. Rakotomalala; A. Benjak; F. R. Rabenja et al. 

Frontiers In Microbiology. 2020-05-11. Vol. 11, p. 711. DOI : 10.3389/fmicb.2020.00711.

Bacteria: Driving polar growth

N. Dhar 

eLife. 2020-05-07. Vol. 9, p. e57043. DOI : 10.7554/eLife.57043.

Machiavellian males with high emotional intelligence exhibit fewer depressive symptoms

R. Bianchi; N. Patthey; D. Mirkovic; B. Lemaitre; K. Schlegel 

Personality and Individual Differences. 2020-05-01. Vol. 158, p. 109867. DOI : 10.1016/j.paid.2020.109867.

A Vibriophage Takes Antirepression to the Next Level

L. F. Lemos Rocha; M. Blokesch 

Cell Host & Microbe. 2020-04-09. Vol. 27, num. 4, p. 493-495. DOI : 10.1016/j.chom.2020.03.019.

Mammalian membrane trafficking as seen through the lens of bacterial toxins

F. S. Mesquita; F. G. van der Goot; O. A. Sergeeva 

Cellular Microbiology. 2020-04-01. Vol. 22, num. 4, p. e13167. DOI : 10.1111/cmi.13167.

Iron sequestration by transferrin 1 mediates nutritional immunity in Drosophila melanogaster

I. Iatsenko; A. Marra; J-P. Boquete; J. Pena; B. Lemaitre 

Proceedings Of The National Academy Of Sciences Of The United States Of America. 2020-03-31. Vol. 117, num. 13, p. 7317-7325. DOI : 10.1073/pnas.1914830117.

COVID-19 epidemic in Switzerland: on the importance of testing, contact tracing and isolation

S. Marcel; A. L. Christian; N. Richard; S. Silvia; H. Emma et al. 

Swiss Medical Weekly. 2020-03-19. Vol. 150, p. w202205. DOI : 10.4414/smw.2020.20225.

Integrated proteogenomic deep sequencing and analytics accurately identify non-canonical peptides in tumor immunopeptidomes

C. Chong; M. Müller; H. Pak; D. Harnett; F. Huber et al. 

Nature Communications. 2020-03-10. Vol. 11, num. 1239. DOI : 10.1038/s41467-020-14968-9.

HLA Heterozygote Advantage against HIV-1 Is Driven by Quantitative and Qualitative Differences in HLA Allele-Specific Peptide Presentation

J. Arora; F. Pierini; P. J. McLaren; M. Carrington; J. Fellay et al. 

Molecular Biology And Evolution. 2020-03-01. Vol. 37, num. 3, p. 639-650. DOI : 10.1093/molbev/msz249.

Contribution of Genetic Background and Data Collection on Adverse Events of Anti-human Immunodeficiency Virus (HIV) Drugs (D:A:D) Clinical Risk Score to Chronic Kidney Disease in Swiss HIV-infected Persons With Normal Baseline Estimated Glomerular Filtration Rate

L. G. Dietrich; C. Barcelo; C. W. Thorball; L. Ryom; F. Burkhalter et al. 

Clinical Infectious Diseases. 2020-03-01. Vol. 70, num. 5, p. 890-897. DOI : 10.1093/cid/ciz280.

Structural and DNA binding properties of mycobacterial integration host factor mIHF

N. T. Odermatt; M. Lelli; T. Herrmann; L. A. Abriata; A. Japaridze et al. 

Journal Of Structural Biology. 2020-03-01. Vol. 209, num. 3, p. 107434. DOI : 10.1016/j.jsb.2019.107434.

Polarly Localized EccE(1) Is Required for ESX-1 Function and Stabilization of ESX-1 Membrane Proteins in Mycobacterium tuberculosis

P. Soler-Arnedo; C. Sala; M. Zhang; S. T. Cole; J. Piton 

Journal Of Bacteriology. 2020-03-01. Vol. 202, num. 5, p. e00662-19. DOI : 10.1128/JB.00662-19.

Renal Purge of Hemolymphatic Lipids Prevents the Accumulation of ROS-Induced Inflammatory Oxidized Lipids and Protects Drosophila from Tissue Damage

X. Li; S. Rommelaere; S. Kondo; B. Lemaitre 

Immunity. 2020-02-18. Vol. 52, num. 2, p. 374-387.e6. DOI : 10.1016/j.immuni.2020.01.008.

The adipokine NimrodB5 regulates peripheral hematopoiesis in Drosophila

E. Ramond; B. Petrignani; J. P. Dudzic; J-P. Boquete; M. Poidevin et al. 

Febs Journal. 2020-02-17. DOI : 10.1111/febs.15237.

Synthesis and Structure-Activity Relationship Studies of C2-Modified Analogs of the Antimycobacterial Natural Product Pyridomycin

M. Kienle; P. Eisenring; B. Stoessel; O. P. Horlacher; S. Hasler et al. 

Journal Of Medicinal Chemistry. 2020-02-13. Vol. 63, num. 3, p. 1105-1131. DOI : 10.1021/acs.jmedchem.9b01457.

KAP1 targets actively transcribed genomic loci to exert pleomorphic effects on RNA polymerase II activity

A. Kauzlaric; S. M. Jang; M. Morchikh; M. Cassano; E. Planet et al. 

Philosophical Transactions of the Royal Society B: Biological Sciences. 2020-02-10. Vol. 375, num. 1795, p. 20190334. DOI : 10.1098/rstb.2019.0334.

Blind killing of both male and female Drosophila embryos by a natural variant of the endosymbiotic bacterium Spiroplasma poulsonii

F. Masson; S. Calderon-Copete; F. Schuepfer; A. Vigneron; S. Rommelaere et al. 

Cellular Microbiology. 2020-01-23.  p. e13156. DOI : 10.1111/cmi.13156.

A biphasic growth model for cell pole elongation in mycobacteria

M. T. M. Hannebelle; J. X. Y. Ven; C. Toniolo; H. A. Eskandarian; G. Vuaridel-Thurre et al. 

Nature Communications. 2020-01-23. Vol. 11, num. 452. DOI : 10.1038/s41467-019-14088-z.

Mechanomicrobiology: how bacteria sense and respond to forces

Y. F. Dufrene; A. Persat 

Nature Reviews Microbiology. 2020-01-20. DOI : 10.1038/s41579-019-0314-2.

Endoplasmic Reticulum and Lysosomal Quality Control of Four Nonsense Mutants of Iduronate 2-Sulfatase Linked to Hunter’s Syndrome

A. Marazza; C. Galli; E. Fasana; J. Sgrignani; P. Burda et al. 

Dna And Cell Biology. 2020-01-02. Vol. 39, num. 2, p. 226-234. DOI : 10.1089/dna.2019.5221.

Structural mechanism of cGAS inhibition by the nucleosome

G. R. Pathare; A. Decout; S. Glück; S. Cavadini; K. Makasheva et al. 

Nature. 2020. DOI : 10.1038/s41586-020-2750-6.

cGAS regulation and activity during genotoxic stress

S-V. Glück / A. Ablasser (Dir.)  

Lausanne, EPFL, 2020. 

Contact networks across ages: computational analysis of epidemiological dynamics

G. Lazzari / M. Salathé (Dir.)  

Lausanne, EPFL, 2020. 

Impact of Genetic and Nongenetic Factors on Body Mass Index and Waist-Hip Ratio Change in HIV-Infected Individuals Initiating Antiretroviral Therapy

C. Barcelo; M. Guidi; C. W. Thorball; C. Hammer; A. Chaouch et al. 

Open Forum Infectious Diseases. 2020-01-01. Vol. 7, num. 1, p. ofz464. DOI : 10.1093/ofid/ofz464.

HIV host genomics in the era of effective antiretroviral therapy

C. A. W. Thorball / J. Fellay; D. Trono (Dir.)  

Lausanne, EPFL, 2020. 

Regulation of cGAS- and RLR-mediated immunity to nucleic acids

A. Ablasser; S. Hur 

Nature Immunology. 2020-01-01. Vol. 21, num. 1, p. 17-29. DOI : 10.1038/s41590-019-0556-1.

New 2-Ethylthio-4-methylaminoquinazoline derivatives inhibiting two subunits of cytochrome bc1 in Mycobacterium tuberculosis

A. Lupien; C. S-Y. Foo; S. Savina; A. Vocat; J. Piton et al. 

Plos Pathogens. 2020-01-01. Vol. 16, num. 1, p. e1008270. DOI : 10.1371/journal.ppat.1008270.

The combination of stereotactic radiosurgery with immune checkpoint inhibition or targeted therapy in melanoma patients with brain metastases: a retrospective study

F. Martins; L. Schiappacasse; M. Levivier; C. Tuleasca; M. A. Cuendet et al. 

Journal Of Neuro-Oncology. 2020-01-01. Vol. 146, num. 1, p. 181-193. DOI : 10.1007/s11060-019-03363-0.

Infection with a small intestinal helminth, Heligmosomoides polygyrus bakeri, consistently alters microbial communities throughout the murine small and large intestine

A. Rapin; A. Chuat; L. Lebon; M. M. Zaiss; B. J. Marsland et al. 

International Journal For Parasitology. 2020-01-01. Vol. 50, num. 1, p. 35-46. DOI : 10.1016/j.ijpara.2019.09.005.

Hemagglutinin of Influenza A, but not of Influenza B and C viruses is acylated by ZDHHC2, 8, 15 and 20

M. R. Gadalla; L. Abrami; F. G. van der Goot; M. Veit 

Biochemical Journal. 2020-01-01. Vol. 477, p. 285-303. DOI : 10.1042/BCJ20190752.

Role of Nimrod receptors in the Drosophila melanogaster cellular immune response

C. Melcarne / B. Lemaitre (Dir.)  

Lausanne, EPFL, 2020. 

Selection of Vibrio crassostreae relies on a plasmid expressing a type 6 secretion system cytotoxic for host immune cells

D. Piel; M. Bruto; A. James; Y. Labreuche; C. Lambert et al. 

Environmental Microbiology. 2020. Vol. 22, num. 10, p. 4198-4211. DOI : 10.1111/1462-2920.14776.

2019

Image-based analysis of living mammalian cells using label-free 3D refractive index maps reveals new organelle dynamics and dry mass flux

P. Sandoz; C. C. G. Tremblay; G. van der Goot; M. Frechin 

PLoS Biology. 2019-12-19. Vol. 17, num. 12, p. e3000553. DOI : 10.1371/journal.pbio.3000553.

Targeting liver stage malaria with metformin

I. M. Vera; M. T. Grilo Ruivo; L. F. Lemos Rocha; S. Marques; S. N. Bhatia et al. 

Jci Insight. 2019-12-19. Vol. 4, num. 24, p. e127441. DOI : 10.1172/jci.insight.127441.

Adult Drosophila Lack Hematopoiesis but Rely on a Blood Cell Reservoir at the Respiratory Epithelia to Relay Infection Signals to Surrounding Tissues

P. S. Bosch; K. Makhijani; L. Herboso; K. S. Gold; R. Baginsky et al. 

Developmental Cell. 2019-12-16. Vol. 51, num. 6, p. 787-+. DOI : 10.1016/j.devcel.2019.10.017.

Computational Analysis of the Mutual Constraints between Single‐Cell Growth and Division Control Models

G. Vuaridel‐Thurre; A. R. Vuaridel; N. Dhar; J. D. McKinney 

Advanced Biosystems. 2019-12-16. Vol. 3, num. 12, p. 1900103. DOI : 10.1002/adbi.201900103.

New insights on Drosophila antimicrobial peptide function in host defense and beyond

M. A. Hanson; B. Lemaitre 

Current Opinion in Immunology. 2019-12-11. Vol. 62, p. 22-30. DOI : 10.1016/j.coi.2019.11.008.

DUX is a non-essential synchronizer of zygotic genome activation

A. De Iaco; S. Verp; S. Offner; D. Grun; D. Trono 

Development. 2019-12-05.  p. dev.177725. DOI : 10.1242/dev.177725.

On the Design of a Youth-Led, Issue-Based, Crowdsourced Global Monitoring Framework for the SDGs

S. P. Mohanty; R. Ramaswamy; A. K. Duraiappah 

Sustainability. 2019-12-02. Vol. 11, num. 23, p. 6839. DOI : 10.3390/su11236839.

Gender medicine and oncology: report and consensus of an ESMO workshop

A. D. Wagner; S. Oertelt-Prigione; A. Adjei; T. Buclin; V. Cristina et al. 

Annals Of Oncology. 2019-12-01. Vol. 30, num. 12, p. 1914-1924. DOI : 10.1093/annonc/mdz414.

Monitoring Tuberculosis Drug Activity in Live Animals by Using Near-Infrared Fluorescence Imaging

R. Sommer; S. T. Cole 

Antimicrobial Agents And Chemotherapy. 2019-12-01. Vol. 63, num. 12, p. e01280-19. DOI : 10.1128/AAC.01280-19.

Latest advances in aging research and drug discovery

D. Bakula; A. Ablasser; A. Aguzzi; A. Antebi; N. Barzilai et al. 

Aging-Us. 2019-11-30. Vol. 11, num. 22, p. 9971-9981. DOI : 10.18632/aging.102487.

Complete inclusion of bioactive molecules and particles in polydimethylsiloxane: a straightforward process under mild conditions

G. Faccio; A. Cont; E. Mailand; E. Zare-Eelanjegh; R. I. Malini et al. 

Scientific Reports. 2019-11-26. Vol. 9, p. 17575. DOI : 10.1038/s41598-019-54155-5.

Weight Loss Directly Influences Intermediate-Term Remission of Diabetes Mellitus After Bariatric Surgery: A Retrospective Case-Control Study

R. de La Harpe; S. Rueger; Z. Kutalik; P. Ballabeni; M. Suter et al. 

Obesity Surgery. 2019-11-21. DOI : 10.1007/s11695-019-04283-8.

Structure of the mitochondrial import gate reveals distinct preprotein paths

Y. Araiso; A. Tsutsumi; J. Qiu; K. Imai; T. Shiota et al. 

Nature. 2019-11-14. Vol. 575, num. 7782, p. 395-+. DOI : 10.1038/s41586-019-1680-7.

Dynamic Evolution of Antimicrobial Peptides Underscores Trade-Offs Between Immunity and Ecological Fitness

M. A. Hanson; B. Lemaitre; R. L. Unckless 

Frontiers In Immunology. 2019-11-08. Vol. 10, p. 2620. DOI : 10.3389/fimmu.2019.02620.

Synthesis, biology, computational studies and in vitro controlled release of new isoniazid-based adamantane derivatives

A. Papageorgiou; A-S. Foscolos; I. P. Papanastasiou; M. Vlachou; A. Siamidi et al. 

Future Medicinal Chemistry. 2019-11-01. Vol. 11, num. 21, p. 2779-2802. DOI : 10.4155/fmc-2019-0038.

Co-expression of CCT subunits hints at TRiC assembly

O. A. Sergeeva; C. Haase-Pettingell; J. A. King 

Cell Stress & Chaperones. 2019-11-01. Vol. 24, num. 6, p. 1055-1065. DOI : 10.1007/s12192-019-01028-5.

Overlapping and essential roles for molecular and mechanical mechanisms in mycobacterial cell division

P. D. Odermatt; M. T. M. Hannebelle; H. A. Eskandarian; A. P. Nievergelt; J. D. McKinney et al. 

Nature Physics. 2019-10-21. DOI : 10.1038/s41567-019-0679-1.

A carrier for cyclic dinucleotides

B. Guey; A. Ablasser 

Nature Immunology. 2019-10-10. Vol. 20, num. 11, p. 1418–1420. DOI : 10.1038/s41590-019-0521-z.

Design, Synthesis and in vitro Controlled Release of New Adamantanodiarylketone Antimycobacterials

M. Vlachou; I. P. Papanastasiou; M-O. Georgiadis; A. Tsakoumagkou; Z. Siskos et al. 

Chemistryselect. 2019-10-09. Vol. 4, num. 37, p. 11048-11051. DOI : 10.1002/slct.201902283.

Preexisting variation in DNA damage response predicts the fate of single mycobacteria under stress

G. Manina; A. Griego; L. K. Singh; J. D. McKinney; N. Dhar 

EMBO Journal. 2019-10-04.  p. e101876. DOI : 10.15252/embj.2019101876.

Systems Biology in 874 Patients with Primary Sjogren’s Syndrome Indicates the Predominant Role of Interferon Alpha Compared to Interferon Gamma, Its Association with Systemic Complications, and a New Aspect of the Genetic Contribution of HLA

P. Bost; X. Mariette; V. Bondet; A. Llibre; C. Posseme et al. 

2019-10-01. 

The H3K9 Methylation Writer SETDB1 and Its Reader MPP8 Cooperate to Silence Satellite DNA Repeats in Mouse Embryonic Stem Cells

P. Cruz-Tapias; P. Robin; J. Pontis; L. Del Maestro; S. Ait-Si-Ali 

Genes. 2019-10-01. Vol. 10, num. 10, p. 750. DOI : 10.3390/genes10100750.

Genome-to-genome analysis of Epstein-Barr virus infection

S. Rueger; C. Hammer; A. Loetscher; E. Zdobnov; J. Fellay 

2019-10-01. 52nd Conference of the European-Society-of-Human-Genetics (ESHG), Gothenburg, SWEDEN, Jun 15-18, 2019. p. 1365-1365.

Transcriptome-wide causal analyses reveals sex-specific biomarkers for complex human traits

E. Porcu; K. Lepik; S. Rueger; F. A. Santoni; A. Reymond et al. 

2019-10-01. 52nd Conference of the European-Society-of-Human-Genetics (ESHG), Gothenburg, Sweden, Jun 15-18, 2019. p. 1771-1771.

Rare variants in antiviral response genes drive severe viral respiratory infections in children

D. Lawless; S. Asgari; L. Schlapbach; J. Fellay 

2019-10-01. 52nd Conference of the European-Society-of-Human-Genetics (ESHG), Gothenburg, SWEDEN, Jun 15-18, 2019. p. 1374-1375.

Human genetic determinants of chronic low-grade inflammation in the general population

F. Hodel; P. Marques-Vidal; P. Vollenweider; J. Fellay 

2019-10-01. 52nd Conference of the European-Society-of-Human-Genetics (ESHG), Gothenburg, SWEDEN, Jun 15-18, 2019. p. 1747-1748.

Predicting the Occurrence of Variants in RAG1 and RAG2

D. Lawless; H. L. Allen; J. Thaventhiran; F. Hodel; R. Anwar et al. 

Journal Of Clinical Immunology. 2019-10-01. Vol. 39, num. 7, p. 688-701. DOI : 10.1007/s10875-019-00670-z.

The type IV pilus protein PilU functions as a PilT-dependent retraction ATPase

D. W. Adams; J. M. Pereira; C. Stoudmann; S. Stutzmann; M. Blokesch 

PLOS Genetics. 2019-09-16. Vol. 15, num. 9, p. e1008393. DOI : 10.1371/journal.pgen.1008393.

A comprehensive assessment of demographic, environmental, and host genetic associations with gut microbiome diversity in healthy individuals

P. Scepanovic; F. Hodel; S. Mondot; V. Partula; A. Byrd et al. 

Microbiome. 2019-09-13. Vol. 7, num. 1, p. 130. DOI : 10.1186/s40168-019-0747-x.

Adaptation of hepatitis C virus to interferon lambda polymorphism across multiple viral genotypes

N. Chaturvedi; E. S. Svarovskaia; H. Mo; A. O. Osinusi; D. M. Brainard et al. 

Elife. 2019-09-03. Vol. 8, p. e42542. DOI : 10.7554/eLife.42542.

Neighbor predation linked to natural competence fosters the transfer of large genomic regions in Vibrio cholerae

N. Matthey; S. Stutzmann; C. Stoudmann; N. Guex; C. Iseli et al. 

eLife. 2019-09-03. Vol. 8, p. e48212. DOI : 10.7554/eLife.48212.

Adverse effects of immune-checkpoint inhibitors: epidemiology, management and surveillance

F. Martins; L. Sofiya; G. P. Sykiotis; F. Lamine; M. Maillard et al. 

Nature Reviews Clinical Oncology. 2019-09-01. Vol. 16, num. 9, p. 563-580. DOI : 10.1038/s41571-019-0218-0.

Mechanisms of DNA Uptake by Naturally Competent Bacteria

D. Dubnau; M. Blokesch 

Annual Review of Genetics. 2019-08-21. Vol. 53, p. 217-37. DOI : 10.1146/annurev-genet-112618-043641.

HIV Transmission Chains Exhibit Greater HLA-B Homogeneity Than Randomly Expected

Huyen Nguyen; C. W. Thorball; J. Fellay; J. Boni; S. Yerly et al. 

Jaids-Journal Of Acquired Immune Deficiency Syndromes. 2019-08-15. Vol. 81, num. 5, p. 508-515. DOI : 10.1097/QAI.0000000000002077.

The interactome of KRAB zinc finger proteins reveals the evolutionary history of their functional diversification

P. Helleboid; M. Heusel; J. Duc; C. Piot; C. W. Thorball et al. 

The EMBO Journal. 2019-08-12.  p. 1-16. DOI : 10.15252/embj.2018101220.

RasGRP1 is a potential biomarker for stratifying anti-EGFR therapy response in colorectal cancer

O. M. Gbenedio; C. Bonnans; D. Grun; C-Y. Wang; A. J. Hatch et al. 

Jci Insight. 2019-08-08. Vol. 4, num. 15, p. e127552. DOI : 10.1172/jci.insight.127552.

Synthesis of New Indole and Adamantane Amido Derivatives with Pharmacological Interest

O. Karoutzou; D. Benaki; I. Papanastasiou; A. Vocat; S. T. Cole 

Chemistryselect. 2019-08-07. Vol. 4, num. 29, p. 8727-8730. DOI : 10.1002/slct.201901303.

KAP1 is an antiparallel dimer with a functional asymmetry

G. Fonti; M. J. Marcaida; L. C. Bryan; S. Traeger; A. S. Kalantzi et al. 

Life Science Alliance. 2019-08-01. Vol. 2, num. 4, p. e201900349. DOI : 10.26508/lsa.201900349.

The antimicrobial peptide defensin cooperates with tumour necrosis factor to drive tumour cell death in Drosophila

J-P. Parvy; Y. Yu; A. Dostalova; S. Kondo; A. Kurjan et al. 

Elife. 2019-07-30. Vol. 8, p. e45061. DOI : 10.7554/eLife.45061.

Determinants of HIV-1 reservoir size and long-term dynamics during suppressive ART

N. Bachmann; C. von Siebenthal; V. Vongrad; T. Turk; K. Neumann et al. 

Nature Communications. 2019-07-19. Vol. 10, p. 3193. DOI : 10.1038/s41467-019-10884-9.

Assessment of menstrual health status and evolution through mobile apps for fertility awareness

L. Symul; K. Wac; P. Hillard; M. Salathe 

npj Digital Medicine. 2019-07-16. Vol. 2, p. 64. DOI : 10.1038/s41746-019-0139-4.

Vibrio cholerae filamentation promotes chitin surface attachment at the expense of competition in biofilms

B. R. Wucher; T. M. Bartlet; M. Hoyos; K. Papenfort; A. Persat et al. 

Proceedings of the National Academy of Sciences. 2019-07-09. Vol. 116, num. 28, p. 14216-14221. DOI : 10.1073/pnas.1819016116.

WHO and ITU establish benchmarking process for artificial intelligence in health

T. Wiegand; R. Krishnamurthy; M. Kuglitsch; N. Lee; S. Pujari et al. 

Lancet. 2019-07-06. Vol. 394, num. 10192, p. 9-11. DOI : 10.1016/S0140-6736(19)30762-7.

Structure and Activity of the Type VI Secretion System

Y. Cherrak; N. Flaugnatti; E. Durand; L. Journet; E. Cascales 

Microbiology Spectrum. 2019-07-01. Vol. 7, num. 4, p. PSIB-0031-2019. DOI : 10.1128/microbiolspec.PSIB-0031-2019.

Two Nimrod receptors, NimC1 and Eater, synergistically contribute to bacterial phagocytosis in Drosophila melanogaster

C. Melcarne; E. Ramond; J. Dudzic; A. J. Bretscher; E. Kurucz et al. 

Febs Journal. 2019-07-01. Vol. 286, num. 14, p. 2670-2691. DOI : 10.1111/febs.14857.

Disruption of the SucT acyltransferase in Mycobacterium smegmatis abrogates succinylation of cell envelope polysaccharides

Z. Palcekova; S. K. Angala; J. M. Belardinelli; H. A. Eskandarian; M. Joe et al. 

Journal Of Biological Chemistry. 2019-06-28. Vol. 294, num. 26, p. 10325-10335. DOI : 10.1074/jbc.RA119.008585.

A Dissection of Oligomerization by the TRIM28 Tripartite Motif and the Interaction with Members of the Krab-ZFP Family

Y. Sun; J. R. Keown; M. M. Black; C. Raclot; N. Demarais et al. 

Journal of Molecular Biology. 2019-06-28. Vol. 431, num. 14, p. 2511-2527. DOI : 10.1016/j.jmb.2019.05.002.

PAX5 as a model to study the evolution of transcription factors’ regulatory networks

F. Martins; A. Coudray; D. Trono 

2019-06-21.  p. 30S-31S.

DNA-uptake pili of Vibrio cholerae are required for chitin colonization and capable of kin recognition via sequence-specific self-interaction

D. W. Adams; S. Stutzmann; C. Stoudmann; M. Blokesch 

Nature Microbiology. 2019-06-10. Vol. 4, p. 1545–1557. DOI : 10.1038/s41564-019-0479-5.

Cellular advective-diffusion drives the emergence of bacterial surface colonization patterns and heterogeneity

T. Rossy; C. D. Nadell; A. Persat 

Nature Communications. 2019-06-06. Vol. 10, p. 2471. DOI : 10.1038/s41467-019-10469-6.

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