Conference Paper, Talks, Posters

2023

Conference Papers

SYSTEMS BIOLOGY APPROACHES ALLOW INVESTIGATING THE SIGNALING AND METABOLIC REPROGRAMMING OF T CELLS

M. Masid; V. Hatzimanikatis; G. Coukos 

2023. Asian Transplantation Week (ATW)/ Annual congress of the Korean-Society-for-Transplantation (KST), Seoul, SOUTH KOREA, NOV 17-19, 2022. p. A20 – A20.

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A NON-CD25-BINDING IL-2 VARIANT FOR THE EXPANSION OR ENGINEERING OF T CELLS THAT CONFER SUPERIOR TUMOR CONTROL

Y. O. Miranda; M. Masid; C. J. Luna; G. M. Montalvo Bereau; T. Muller et al. 

2023. Asian Transplantation Week (ATW)/ Annual congress of the Korean-Society-for-Transplantation (KST), Seoul, SOUTH KOREA, NOV 17-19, 2022. p. A21 – A22.

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2018

Conference Papers

Enforcing Model Adequacy in Real-Time Optimization via Dedicated Parameter Adaptation

A. Ahmad; M. Singhal; W. Gao; D. Bonvin; S. Engell 

2018. 10th IFAC Symposium on Advanced Control of Chemical Processes (ADCHEM), Shenyang, PEOPLES R CHINA, Jul 25-27, 2018. p. 49 – 54. DOI : 10.1016/j.ifacol.2018.09.246.

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Adaptation strategies for tracking constraints under plant-model mismatch

M. Singhal; T. Faulwasser; D. Bonvin 

2018. 10th IFAC Symposium on Advanced Control of Chemical Processes (ADCHEM), Shenyang, PEOPLES R CHINA, Jul 25-27, 2018. p. 833 – 838. DOI : 10.1016/j.ifacol.2018.09.254.

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2009

Conference Papers

Analysis and synthesis of novel metabolic pathways

E. C. Brunk; M. Neri; U. Roethlisberger; V. Hatzimanikatis 

2009.  p. 375 – BIOT.

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Quantification of uncertainty in metabolic networks through the sampling of kinetic data space

L. Miskovic; V. Hatzimanikatis 

2009. Fosbe2009, Denver, Colorado, August 9-12, 2009.

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Analysis of genome-scale metabolic model of mycobacterium tuberculosis for new combat strategies

M. E. Oezdemir; K. C. Soh; J. D. McKinney; V. Hatzimanikatis 

2009.  p. 329 – BIOT.

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BIOT 428-Optimization of ethanol production from xylose in Saccharomyces cerevisiae

V. Hatzimanikatis; L. Miskovic 

2009. 

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2008

Conference Papers

Informative data: how to get just sufficiently rich?

M. Gevers; A. Bazanella; L. Miskovic 

2008. 47th Conference on Decision and Control, Cancun, Mexico, December 9-11, 2008. p. 1962 – 1967. DOI : 10.1109/CDC.2008.4738735.

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2007

Conference Papers

Closed-loop identification of MIMO systems: a new look at identifiability and experiment design

A. Bazanella; M. Gevers; L. Miskovic 

2007. European Control Conference 2007, Kos, Greece, July, 2007. p. 5694 – 5699. DOI : 10.23919/ECC.2007.7068792.

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On the shape of H2 performance criteria

A. Bazanella; M. Gevers; L. Miskovic; B. D. O. Anderson 

2007. IFAC SSSC Conference 2007, Foz de Iguacu, Brazil, October 2007. DOI : 10.3182/20071017-3-BR-2923.00032.

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2006

Conference Papers

Perturbation rejection control strategy for OWL

B. Sedghi; L. Miskovic; M. Dimmler 

2006. SPIE Conference: Modeling, Systems Engineering, and Project Management for Astronomy, Orlando, FL, USA, 2006-05-30. p. 62710L – 1. DOI : 10.1117/12.671462.

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Direct Closed-Loop Identification of Multi-Input Systems: Variance Analysis

L. Miskovic; A. Karimi; D. Bonvin; M. Gevers 

2006. XIV IFAC Symposium on System Identification, Newcastle, Australia, 29-31.03.2006. p. 873 – 878. DOI : 10.3182/20060329-3-AU-2901.00138.

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On the Input Design for Data-Driven Correlation-Based Tuning of Multivariable Controllers

L. Miskovic; A. Karimi; D. Bonvin; M. Gevers 

2006. XIV IFAC Symposium on System Identification, Newcastle, Australia, 29-31.03.2006. p. 1103 – 1108. DOI : 10.3182/20060329-3-AU-2901.00177.

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2005

Conference Papers

Exploring the diversity of metabolism

V. Hatzimanikatis; C. Li; J. A. Ionita; C. S. Henry; M. Jankowski et al. 

2005.  p. BTEC – 019.

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Analysis of yeast metabolism using metabolic control analysis under uncertainty

L. Wang; V. Hatzimanikatis 

2005.  p. BIOT – 287.

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From single module to signaling cascade networks: Network performance of ultrasensitive modules

T. R. Rieger; V. Hatzimanikatis 

2005.  p. BIOT – 419.

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Identification of a Two-Input System: Variance Analysis

M. Gevers; L. Miskovic; D. Bonvin; A. Karimi 

2005. 16th IFAC World Congress, Prague, July 4-8, 2005. p. 674 – 679. DOI : 10.3182/20050703-6-CZ-1902.00113.

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Bistability of protein aggregation as a function of molecular chaperone concentration

T. R. Rieger; R. I. Morimoto; V. Hatzimanikatis 

2005.  p. BIOT – 326.

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Analysis of free energy change and thermodynamic feasibility in a genome scale metabolic model

C. S. Henry; M. Jankowski; L. J. Broadbelt; V. Hatzimanikatis 

2005.  p. BIOT – 095.

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Systems-wide mathematical and computational framework for translation: Insights into regulation of protein expression in S. cerevisiae

A. Mehra; V. Hatzimanikatis 

2005.  p. BIOT – 420.

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Correlation-Based Tuning of Linear Multivariable Decoupling Controllers

L. Miskovic; A. Karimi; D. Bonvin; M. Gevers 

2005. 44th IEEE Conference on Decision and Control and European Control Conference, Seville, Spain, 12-15.12.2005. p. 7144 – 7149. DOI : 10.1109/CDC.2005.1583313.

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2004

Conference Papers

Accuracy Aspects of Iterative Correlation-Based Controller Tuning

L. Miskovic; A. Karimi; D. Bonvin 

2004. IEEE American Control Conference, Boston, USA, July 2004. p. 4529 – 4534. DOI : 10.23919/ACC.2004.1384024.

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2003

Conference Papers

Quantification and characterization of uncertainty in metabolic engineering

V. Hatzimanikatis; I. Birol; J. Shi; L. Wang 

2003.  p. BIOT – 169.

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Iterative Controller Tuning by Minimization of a Generalized Decorrelation Criterion

L. Miskovic; A. Karimi; D. Bonvin 

2003. SYSID, Rotterdam, The Netherlands, August 2003. p. 1177 – 1182. DOI : 10.1016/S1474-6670(17)34912-1.

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Data-Driven Controller Tuning

L. Miskovic; A. Karimi; D. Bonvin 

2003. AIChE Annual Meeting, San Francisco, USA, November 2003.

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A computational framework for the discovery of novel biotransformations

V. Hatzimanikatis; C. Li; J. A. Ionita; L. J. Broadbelt 

2003.  p. BIOT – 111.

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Correlation-Based Tuning of a Restricted-Complexity Controller for an Active Suspension System

L. Miskovic; A. Karimi; D. Bonvin 

2003. International Workshop on Design and Optimization of Restricted Complexity Controllers, Grenoble, France, 15-16.01.2003. p. 138 – 143.

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2002

Conference Papers

Convergence Analysis of an Iterative Correlation-Based Controller Tuning Method

A. Karimi; L. Miskovic; D. Bonvin 

2002. IFAC World Congress, Barcelona, Spain, July 2002.

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Iterative Correlation-Based Controller Tuning: Frequency Domain Analysis

A. Karimi; L. Miskovic; D. Bonvin 

2002. IEEE Conference on Decision and Control, Las Vegas, Nevada USA / december 2002, p. 4215 – 4220. DOI : 10.1109/CDC.2002.1185031.

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2000

Conference Papers

Simulation of air turbulence signal and its applications

Z. Djurovic; L. Miskovic; B. Kovacevic 

2000. 10th Mediterranean Electrotechnical Conference. Information Technology and Electrotechnology for the Mediterranean Countries, Lemesos, Cyprus, 29-31 May 2000. p. 847 – 850. DOI : 10.1109/MELCON.2000.880066.

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Mathematical framework for correlating mRNA and protein expression profiles

V. Hatzimanikatis; J. Kolstad; K. H. Lee 

2000.  p. BIOT – 296.

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1999

Conference Papers

Velocity tracking based on adaptive Doppler filters

V. Papic; Z. Djurovic; L. Miskovic; B. Kovacevic 

1999. 4th International Conference on Telecommunications in Modern Satellite, Cable and Broadcasting Services. TELSIKS’99, Nis, Serbia, 13-15 Oct. 1999. p. 624 – 627. DOI : 10.1109/TELSKS.1999.806288.

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1997

Conference Papers

Metabolic fluxes in central carbon metabolism of Bacillus subtilis

U. Sauer; V. Hatzimanikatis; T. Szyperski; K. Wuthrich; J. E. Bailey 

1997.  p. BIOC – 051.

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