Publications

Our latest publications

Asymmetric envelope surface disposition of secreted protein YjbI controls bimodal antibiotic susceptibilities in C. crescentus

J. Costafrolaz; L. Degeorges; G. Panis; S-U. Vallet; M. V. Gomariz et al. 

The EMBO Journal. 2026. DOI : 10.1038/s44318-025-00668-x.

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ModelCIF Update: Supporting Emerging Classes of Computational Macromolecular Models

G. Tauriello; Y. Lill; J. Sgrignani; V. Zoete; B. Singer et al. 

Journal of molecular biology. 2026. DOI : 10.1016/j.jmb.2026.169658.

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Wide-field fluorescence lifetime imaging of single molecules with a gated single-photon camera

N. Ronceray; S. Bennani; M. F. Mitsioni; N. Siegel; M. J. Marcaida et al. 

Light, science & applications. 2025. Vol. 14, num. 1. DOI : 10.1038/s41377-025-01901-2.

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Lumen charge governs gated ion transport in β-barrel nanopores

S. F. Mayer; M. F. Mitsioni; P. Robin; L. van den Heuvel; N. Ronceray et al. 

Nature Nanotechnology. 2025. DOI : 10.1038/s41565-025-02052-6.

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MolecularWeb Democratizes Web-Based, Immersive, Multiuser Molecular Graphics And Modeling

F. C. Rodríguez; L. F. Krapp; F. T. P. Meireles; M. Dal Peraro; L. A. Abriata 

2025

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Cardiolipin dynamics promote membrane remodeling by mitochondrial OPA1

S. Thatavarthy; L. A. Abriata; F. T. P. Meireles; K. E. Zuccaro; A. Gargey et al. 

Nature Communications. 2025. Vol. 16, num. 1. DOI : 10.1038/s41467-025-63813-4.

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Structure of the Huntingtin F-actin complex reveals its role in cytoskeleton organization

R. Carpentier; J. Kim; M. Capizzi; H. Kim; F. Fäßler et al. 

Science Advances. 2025. Vol. 11, num. 38. DOI : 10.1126/sciadv.adw4124.

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Sub-Nanomolar Detection and Discrimination of Microcystin Congeners Using Aerolysin Nanopores

A. Agerova; J. F. Bada Juarez; L. A. Abriata; M. J. Marcaida Lopez; A. Carratala et al. 

2025

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Exploring New Nanopore Sensors from the Aerolysin Family

J. F. Bada Juarez; N. Cirauqui; F. A. T. P. Meireles; L. W. Perrin; J. Barry et al. 

Small. 2025. DOI : 10.1002/smll.202501219.

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Practical outcomes from CASP16 for users in need of biomolecular structure prediction

L. A. Abriata; M. Dal Peraro 

2025

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Molecular Regulation and Physiological Role of GOLPH3-mediated Golgi retention

A. Theodoropoulou; A. Nasrallah; L. A. Abriata; L. Abrami; F. Talotta et al. 

2025

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Context-aware geometric deep learning for RNA sequence design

P. Bibekar; L. F. Krapp; M. Dal Peraro 

2025

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Analysis of Integrator-Differentiator Transimpedance Amplifiers: Speed and Gain Tradeoff Introduced by Parasitic Capacitances

M. Saberi; C. Cao; M. D. Peraro; A. Schmid 

IEEE Transactions on Instrumentation and Measurement. 2025. DOI : 10.1109/tim.2025.3573761.

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The HP1 box of KAP1 organizes HP1α for silencing of endogenous retroviral elements in embryonic stem cells

N. Gaurav; R. O’Hara; U. Hyder; W. Qin; C. Her et al. 

Nature Communications. 2025. Vol. 16, num. 1. DOI : 10.1038/s41467-025-60279-2.

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The Need to Implement Fair Principles in Biomolecular Simulations

R. E. Amaro; J. Aqvist; I. Bahar; F. Battistini; A. Bellaiche et al. 

NATURE METHODS. 2025. Vol. 22, num. 4, p. 641 – 645. DOI : 10.1038/s41592-025-02635-0.

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