CLoNe parameters:
> P_dc: 5.000000
> Filtering fraction: 0.100000
> n_resize: 4.000000

Structural ensemble:
> Trajectory: structural_ensembles/APP_bound.xtc
> Topology: structural_ensembles/APP.psf
> Feature file: structural_ensembles/APP_bound_dist_motifs.txt
> PCA: 2
